• Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny 

      Cappellini, Enrico; Welker, Frido; Pandolfi, Luca; Ramos-Madrigal, Jazmín; Samodova, Diana; Rüther, Patrick L.; Fotakis, Anna K.; Lyon, David; Moreno-Mayar, J. Víctor; Bukhsianidze, Maia; Jersie-Christensen, Rosa Rakownikow; Mackie, Meaghan; Ginolhac, Aurélien; Ferring, Reid; Tappen, Martha; Palkopoulou, Eleftheria; Dickinson, Marc R.; Stafford, Jr., Thomas W.; Chan, Yvonne L.; Götherström, Anders; Nathan, Senthilvel K.S.S.; Heintzman, Peter D.; Kapp, Joshua D.; Kirillova, Irina V.; Moodley, Yoshan; Agusti, Jordi; Kahlke, Ralf-Dietrich; Kiladze, Gocha; Martínez-Navarro, Bienvenido; Liu, Shanlin; Sandoval Velasco, Marcela; Sinding, Mikkel-Holger S.; Kelstrup, Christian D.; Allentoft, Morten E.; Orlando, Ludovic; Penkman, Kirsty; Shapiro, Beth; Rook, Lorenzo; Dalén, Love; Gilbert, Marcus Thomas Pius; Olsen, Jesper V.; Lordkipanidze, David; Willerslev, Eske (Journal article; Tidsskriftartikkel; Peer reviewed, 2019-09-11)
      The sequencing of ancient DNA has enabled the reconstruction of speciation, migration and admixture events for extinct taxa. However, the irreversible post-mortem degradation of ancient DNA has so far limited its recovery—outside permafrost areas—to specimens that are not older than approximately 0.5 million years (Myr). By contrast, tandem mass spectrometry has enabled the sequencing of approximately ...
    • Integrating multi-taxon palaeogenomes and sedimentary ancient DNA to study past ecosystem dynamics 

      Dussex, Nicolas; Bergfeldt, Nora; de Anca Prado, Violeta; Dehasque, Marianne; Díez-del-Molino, David; Ersmark, Erik; Kanellidou, Foteini; Larsson, Petter; Lemež, Špela; Lord, Edana; Marmol-Sanchez, Emilio; Meleg, Ioana N.; Måsviken, Johannes; Naidoo, Thijessen; Studerus, Jovanka; Vicente, Mário; von Seth, Johanna; Götherström, Anders; Dalén, Love; Heintzman, Peter D. (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-08-25)
      Ancient DNA (aDNA) has played a major role in our understanding of the past. Important advances in the sequencing and analysis of aDNA from a range of organisms have enabled a detailed understanding of processes such as past demography, introgression, domestication, adaptation and speciation. However, to date and with the notable exception of microbiomes and sediments, most aDNA studies have focused ...
    • Million-year-old DNA sheds light on the genomic history of mammoths 

      van der Valk, Tom; Pečnerová, Patrícia; Díez-del-Molino, David; Bergström, Anders; Oppenheimer, Jonas; Hartmann, Stefanie; Xenikoudakis, Georgios; Thomas, Jessica A.; Dehasque, Marianne; Sağlıcan, Ekin; Rabia Fidan, Fatma; Barnes, Ian; Liu, Shanlin; Somel, Mehmet; Heintzman, Peter D.; Nikolskiy, Pavel; Shapiro, Beth; Skoglund, Pontus; Hofreiter, Michael; Lister, Adrian M.; Götherström, Anders; Dalén, Love (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-02-17)
      Temporal genomic data hold great potential for studying evolutionary processes such as speciation. However, sampling across speciation events would, in many cases, require genomic time series that stretch well back into the Early Pleistocene subepoch. Although theoretical models suggest that DNA should survive on this timescale1, the oldest genomic data recovered so far are from a horse specimen ...
    • Population genomics of Mesolithic Scandinavia: Investigating early postglacial migration routes and high-latitude adaptation 

      Günther, Torsten; Malmström, Helena; Svensson, Emma M.; Omrak, Ayça; Sánchez-Quinto, Frederico; Kılınç, Gülşah M.; Krzewinska, Maja; Eriksson, Gunilla; Fraser, Magdalena; Edlund, Hanna; Munteres, Arielle R.; Coutinho, Alexandra; Simões, Luciana G.; Vicente, Mário; Sjölander, Anders; Sellevold, Berit J.; Jørgensen, Roger; Claes, Peter; Shriver, Mark D.; Valdiosera, Cristina; Netea, Mihai G.; Apel, Jan; Lidén, Kerstin Birgitta; Skar, Birgitte; Storå, Jan; Götherström, Anders; Jakobsson, Mattias (Journal article; Tidsskriftartikkel; Peer reviewed, 2018-01-09)
      Scandinavia was one of the last geographic areas in Europe to become habitable for humans after the Last Glacial Maximum (LGM). However, the routes and genetic composition of these postglacial migrants remain unclear. We sequenced the genomes, up to 57× coverage, of seven hunter-gatherers excavated across Scandinavia and dated from 9,500–6,000 years before present (BP). Surprisingly, among the ...
    • Pre-extinction demographic stability and genomic signatures of adaptation in the woolly rhinoceros 

      Lord, Edana; Dussex, Nicolas; Kierczak, Marcin; Díez-del-Molino, David; Ryder, Oliver A.; Stanton, David W. G.; Gilbert, Marcus Thomas Pius; Sánchez-Barreiro, Fatima; Zhang, Guojie; Sinding, Mikkel-Holger S.; Lorenzen, Eline D.; Willerslev, Eske; Protopov, Albert; Shidlovskiy, Fedor K.; Fedorov, Sergey; Bocherens, Hervé; Nathan, Senthilvel K.S.S.; Goossens, Benoit; van der Plicht, Johannes; Chan, Yvonne L.; Prost, Stefan; Potapova, Olga R; Kirillova, Irina V.; Lister, Adrian M.; Heintzman, Peter D.; Kapp, Joshua D.; Shapiro, Beth; Vartanyan, Sergey; Götherström, Anders; Dalén, Love (Journal article; Tidsskriftartikkel; Peer reviewed, 2020-08-13)
      Ancient DNA has significantly improved our understanding of the evolution and population history of extinct megafauna. However, few studies have used complete ancient genomes to examine species responses to climate change prior to extinction. The woolly rhinoceros (<i>Coelodonta antiquitatis</i>) was a cold-adapted megaherbivore widely distributed across northern Eurasia during the Late Pleistocene ...
    • To the field of stars: Stable isotope analysis of medieval pilgrims and populations along the Camino de Santiago in Navarre and Aragon, Spain 

      Pérez-Ramallo, Patxi; Ignacio Lorenzo-Lizalde, José; Staniewska, Alexandra; Aiestaran, Mattin; Aguirre, Juantxo; Semas Sesma, Jesús; Marzo, Sara; Lucas, Mary; Ilgner, Jana; Chivall, David; Higham, Tom; Rodríguez-Varela, Ricardo; Götherström, Anders; Etxeberria, Francisco; Grandal-d'Anglade, Aurora; Alexander, Michelle; Roberts, Patrick (Journal article; Tidsskriftartikkel; Peer reviewed, 2023-02-01)
      The Camino de Santiago emerged in the first half of the 9th century CE following the reported discovery of the remains of the Apostle St James by the bishop of Iria-Flavia, Teodomiro. Since then, hundreds of thousands of pilgrims have walked from different parts of the Iberian Peninsula, Europe, and further afield to Santiago de Compostela's Cathedral. This route was particularly important to the ...